Protein ZmHAG18
ZmHAG18 is a protein in the GNAT family.
Information
Coreg Name: ZmHAG18
Species: Maize
Coreg Family: GNAT
Gene Name(Synonym): HAGTF18
Uniprot ID: A0A1D6PDQ1
Subgenome: 2

Protein ZmHAG18

ZmHAG18 is a protein in the GNAT family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d049501DAPseq no logo sequence fimo position
Zm00001d049501DAPseq no logo sequence fimo position
Zm00001d049501ChIPseq no logo sequence fimo position
Zm00001d049501PChIPseq no logo sequence fimo position

Interactions where ZmHAG18 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmHAG18 is the target  
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There are 30 protein-dna interactions that fit this criteria. download excel sheet

GRMZM2G055141_T01 from maize genome v3


Related TFome: pUT6577

Amino Acid Sequence
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MRGPCPGGGVSASFAPSFNGSRAMIWPATVNCTRRIRISFIQTAKTGPFRAGDRATGGICYASQAVELLPTLYPEIVVRD
ARLEDCWEVADTHCSSFFPGYKFPLDLVLRIDRYIALLSGFSVPPGCMRTCLVAVNSNSVNSSFNIECGDATDANFEKYN
LSRGSVAGILTLDTVADYLPRRGPLKQRRTGIAYIANVAVRKEERRKGIAKMLVQEAEARARSWGCRSMALHCDVNNVAA
LRLYRNQGFKCIRVPEGAKWPEPKIAKGAEYNFMMKLVPKA

MRGPCPGGGVSASFAPSFNGSRAMIWPATVNCTRRIRISFIQTAKTGPFRAGDRATGGICYASQAVELLPTLYPEIVVRD
ARLEDCWEVADTHCSSFFPGYKFPLDLVLRIDRYIALLSGFSVPPGCMRTCLVAVNSNSVNSSFNIECGDATDANFEKYN
LSRGSVAGILTLDTVADYLPRRGPLKQRRTGIAYIANVAVRKEERRKGIAKMLVQEAEARARSWGCRSMALHCDVNNVAA
LRLYRNQGFKCIRVPEGAKWPEPKIAKGAEYNFMMKLVPKA

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available

Nucleotide Sequence
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GAAAAAGGACAATGGCTCTCTGTAT...

GRMZM2G055141_T02 from maize genome v3

Amino Acid Sequence
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MRTCLVAVNSNSVNSSFNIECGDATDANFEKYNLSRGSVAGILTLDTVADYLPRRGPLKQRRTGIAYIANVAVRKEERRK
GIAKMLVQEAEARARSWGCRSMALHCDVNNVAALRLYRNQGFKCIRVPEGAKWPEPKIAKGAEYNFMMKLVPKA

Nucleotide Sequence
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GAAAAAGGACAATGGCTCTCTGTAT...

Zm00001d049501_T001 from maize genome v4

Amino Acid Sequence
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MRGPCPGGGVSASFAPSFNGSRAMIWPATVNCTRRIRISFIQTAKTGPFRAGDRATGGICYASQAVELLPTLYPEIVVRD
ARLEDCWEVADTHCSSFFPGYKFPLDLVLRIDRYIALLSGFSVPPGCMRTCLVAVNSNSVNSSFNIECGDATDANFEKYN
LSRGSVAGILTLDTVADYLPRRGPLKQRRTGIAYIANVAVRKEERRKGIAKMLVQEAEARARSWGCRSMALHCDVNNVAA
LRLYRNQGFKCIRVPEGAKWPEPKIAKGAEYNFMMKLVPKA

Nucleotide Sequence
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GAAAAAGGACAATGGCTCTCTGTAT...

Zm00001eb172140_T001 from maize genome v5

Amino Acid Sequence
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MRGPCPGGGVSASFAPSFNGSRAMIWPATVNCTRRIRISFIQTAKTGPFRAGDRATGGICYASQAVELLPTLYPEIVVRD
ARLEDCWEVADTHCSSFFPGYKFPLDLVLRIDRYIALLSGFSVPPGCMRTCLVAVNSNSVNSSFNIECGDATDANFEKYN
LSRGSVAGILTLDTVADYLPRRGPLKQRRYCVYSKRRGAEGGATERDREDVGPRSRGSGKELGMPVDGTALRRKQRGRAT
PVQKPRLQVHTSAGRS

Nucleotide Sequence
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GAAAAAGGACAATGGCTCTCTGTAT...

Zm00001eb172140_T002 from maize genome v5

Amino Acid Sequence
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MRGPCPGGGVSASFAPSFNGSRAMIWPATVNCTRRIRISFIQTAKTGPFRAGDRATGGICYASQAVELLPTLYPEIVVRD
ARLEDCWEVADTHCSSFFPGYKFPLDLVLRIDRYIALLSGFSVPPGCMRTCLVAVNSNSVNSSFNIECGDATDANFEKYN
LSRGSVAGILTLDTVADYLPRRGPLKQRRTGIAYIANVAVRKEERRKGIAKMLVQEAEARARSWGCRSMALHCDVNNVAA
LRLYRNQGFKCIRVPEGAKWPEPKIAKGAEYNFMMKLVPKA

Nucleotide Sequence
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GAAAAAGGACAATGGCTCTCTGTAT...


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