Protein ZmHAG18 | |
---|---|
Information | |
Coreg Name: | ZmHAG18 |
Species: | Maize |
Coreg Family: | GNAT |
Gene Name(Synonym): | HAGTF18 |
Uniprot ID: | A0A1D6PDQ1 |
Subgenome: | 2 |
ZmHAG18 is a protein in the GNAT family. NOTE the "Uniprot ID" shown on the right is a placeholder for testing. The interactive structure shown is based on that id.
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d049501 | DAPseq | sequence | fimo | position | |
Zm00001d049501 | DAPseq | sequence | fimo | position | |
Zm00001d049501 | ChIPseq | sequence | fimo | position | |
Zm00001d049501 | PChIPseq | sequence | fimo | position |
MRGPCPGGGVSASFAPSFNGSRAMIWPATVNCTRRIRISFIQTAKTGPFRAGDRATGGICYASQAVELLPTLYPEIVVRD
ARLEDCWEVADTHCSSFFPGYKFPLDLVLRIDRYIALLSGFSVPPGCMRTCLVAVNSNSVNSSFNIECGDATDANFEKYN
LSRGSVAGILTLDTVADYLPRRGPLKQRRTGIAYIANVAVRKEERRKGIAKMLVQEAEARARSWGCRSMALHCDVNNVAA
LRLYRNQGFKCIRVPEGAKWPEPKIAKGAEYNFMMKLVPKA
MRGPCPGGGVSASFAPSFNGSRAMIWPATVNCTRRIRISFIQTAKTGPFRAGDRATGGICYASQAVELLPTLYPEIVVRD
ARLEDCWEVADTHCSSFFPGYKFPLDLVLRIDRYIALLSGFSVPPGCMRTCLVAVNSNSVNSSFNIECGDATDANFEKYN
LSRGSVAGILTLDTVADYLPRRGPLKQRRTGIAYIANVAVRKEERRKGIAKMLVQEAEARARSWGCRSMALHCDVNNVAA
LRLYRNQGFKCIRVPEGAKWPEPKIAKGAEYNFMMKLVPKA
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
GAAAAAGGACAATGGCTCTCTGTAT...
GAAAAAGGACAATGGCTCTCTGTATCTCATCCTTATCCTTTCCCCACGATTCCTTCTCTCCTCTCTTGCGCCGCCGCTGGCCCAGCGCGGCCGCCGTGCTCCTTCTCCACTCGTGCTTCCCAAGCTGCTTCGCCGGAAGCAATGCGAGGGCCCTGCCCCGGTGGAGGCGTCTCGGCGTCTTTTGCCCCGAGCTTCAACGGCTCCCGCGCCATGATCTGGCCGGCAACAGTAAATTGCACGAGACGGATCCGCATTTCATTCATCCAAACAGCCAAAACGGGGCCGTTCCGCGCAGGCGACAGGGCTACGGGAGGAATTTGCTATGCTAGCCAGGCGGTTGAATTGCTGCCCACTTTGTACCCTGAAATCGTGGTCCGAGACGCACGGCTCGAGGACTGCTGGGAAGTGGCTGACACTCACTGCAGCTCGTTCTTTCCTGGTTACAAGTTCCCGTTGGACCTTGTTCTCCGGATTGATCGTTACATTGCTCTCCTCTCTGGATTTTCAGTTCCACCCGGCTGCATGAGGACTTGCCTTGTGGCCGTCAATTCTAATTCTGTAAATAGTAGTTTCAACATCGAGTGTGGAGATGCTACAGATGCCAACTTTGAGAAATACAATCTCAGTAGAGGCTCCGTAGCTGGCATTCTTACACTTGATACAGTGGCAGACTATCTTCCGAGAAGGGGACCCCTGAAGCAGAGAAGGACAGGTATTGCGTATATAGCAAACGTCGCGGTGCGGAAGGAGGAGCGACGGAAAGGGATCGCGAAGATGTTGGTCCAAGAAGCAGAGGCTCGGGCAAGGAGCTGGGGATGCCGGTCGATGGCACTGCACTGCGACGTAAACAACGTGGCCGCGCTACGCCTGTACAGAAACCAAGGCTTCAAGTGCATACGAGTGCCGGAAGGAGCTAAATGGCCCGAACCCAAGATAGCTAAAGGAGCGGAGTACAACTTCATGATGAAGCTAGTGCCCAAGGCTTGAGTCTTGAACCTTATAAGATCTGACTAGGGAAAAAAAGGGAAAGGTTTGGCCGTGTAGGTTCTGCACGGATGCACGATTTGCTCTCCATTCATGTGTACAGCATTTGGTGTATAGTGGAGGCTACTTTGTAAATGGTATATATAACAGCTACGTGTTGGTCCATAGTGAGTGACTGAGGGTGTCGGTGTTTAAACCATCCCCAGTCCTTGTGTTGTTGTGTGTTATGTTCTTCAGATTCTACAAGGTTCCAGCCAGCCAGAAGGCTGCTGGGGCGAACTGCCAGTTCTAAATTGTTTTTTTTTCTGGAGATACAGACCGGCTTGTCATATAGGGCTGGTTTGATAATAAAAAAATTAAATGGATATATGAGAGG
MRTCLVAVNSNSVNSSFNIECGDATDANFEKYNLSRGSVAGILTLDTVADYLPRRGPLKQRRTGIAYIANVAVRKEERRK
GIAKMLVQEAEARARSWGCRSMALHCDVNNVAALRLYRNQGFKCIRVPEGAKWPEPKIAKGAEYNFMMKLVPKA
GAAAAAGGACAATGGCTCTCTGTAT...
GAAAAAGGACAATGGCTCTCTGTATCTCATCCTTATCCTTTCCCCACGATTCCTTCTCTCCTCTCTTGCGCCGCCGCTGGCCCAGCGCGGCCGCCGTGCTCCTTCTCCACTCGTGCTTCCCAAGCTGCTTCGCCGGAAGCAATGCGAGGGCCCTGCCCCGGTGGAGGCGTCTCGGCGTCTTTTGCCCCGAGCTTCAACGGCTCCCGCGCCATGATCTGTAAATTGCACGAGACGGATCCGCATTTCATTCATCCAAACAGCCAAAACGGGGCCGTTCCGCGCAGGCGACAGGGCTACGGGAGGAATTTGCTATGCTAGCCAGGCGGTTGAATTGCTGCCCACTTTGTACCCTGAAATCGTGGTCCGAGACGCACGGCTCGAGGACTGCTGGGAAGTGGCTGACACTCACTGCAGCTCGTTCTTTCCTGGTTACAAGTTCCCGTTGGACCTTGTTCTCCGGATTGATCGTTACATTGCTCTCCTCTCTGGATTTTCAGTTCCACCCGGCTGCATGAGGACTTGCCTTGTGGCCGTCAATTCTAATTCTGTAAATAGTAGTTTCAACATCGAGTGTGGAGATGCTACAGATGCCAACTTTGAGAAATACAATCTCAGTAGAGGCTCCGTAGCTGGCATTCTTACACTTGATACAGTGGCAGACTATCTTCCGAGAAGGGGACCCCTGAAGCAGAGAAGGACAGGTATTGCGTATATAGCAAACGTCGCGGTGCGGAAGGAGGAGCGACGGAAAGGGATCGCGAAGATGTTGGTCCAAGAAGCAGAGGCTCGGGCAAGGAGCTGGGGATGCCGGTCGATGGCACTGCACTGCGACGTAAACAACGTGGCCGCGCTACGCCTGTACAGAAACCAAGGCTTCAAGTGCATACGAGTGCCGGAAGGAGCTAAATGGCCCGAACCCAAGATAGCTAAAGGAGCGGAGTACAACTTCATGATGAAGCTAGTGCCCAAGGCTTGAGTCTTGAACCTTATAAGATCTGACTAGGGAAAAAAAGGGAAAGGTTTGGCCGTGTAGGTTCTGCACGGATGCACGATTTGCTCTCCATTCATGTGTACAGCATTTGGTGTATAGTGGAGGCTACTTTGTAAATGGTATATATAACAGCTACGTGTTGGTCCATAGTGAGTGACTGAGGGTGTCGGTGTTTAAACCATCCCCAGTCCTTGTGTTGTTGTGTGTTATGTTCTTCAGATTCTACAAGGTTCCAGCCAGCCAGAAGGCTGCTGGGGCGAACTGCCAGTTCTAAATTGTTTTTTTTTCTGGAGATACAGACCGGCTTGTCATATAGGGCTGGTTTGATAATAAAAAAATTAAATGGATATATGAGAGG
MRGPCPGGGVSASFAPSFNGSRAMIWPATVNCTRRIRISFIQTAKTGPFRAGDRATGGICYASQAVELLPTLYPEIVVRD
ARLEDCWEVADTHCSSFFPGYKFPLDLVLRIDRYIALLSGFSVPPGCMRTCLVAVNSNSVNSSFNIECGDATDANFEKYN
LSRGSVAGILTLDTVADYLPRRGPLKQRRTGIAYIANVAVRKEERRKGIAKMLVQEAEARARSWGCRSMALHCDVNNVAA
LRLYRNQGFKCIRVPEGAKWPEPKIAKGAEYNFMMKLVPKA
GAAAAAGGACAATGGCTCTCTGTAT...
GAAAAAGGACAATGGCTCTCTGTATCTCATCCTTATCCTTTCCCCACGATTCCTTCTCTCCTCTCTTGCGCCGCCGCTGGCCCAGCGCGGCCGCCGTGCTCCTTCTCCACTCGTGCTTCCCAAGCTGCTTCGCCGGAAGCAATGCGAGGGCCCTGCCCCGGTGGAGGCGTCTCGGCGTCTTTTGCCCCGAGCTTCAACGGCTCCCGCGCCATGATCTGGCCGGCAACAGTAAATTGCACGAGACGGATCCGCATTTCATTCATCCAAACAGCCAAAACGGGGCCGTTCCGCGCAGGCGACAGGGCTACGGGAGGAATTTGCTATGCTAGCCAGGCGGTTGAATTGCTGCCCACTTTGTACCCTGAAATCGTGGTCCGAGACGCACGGCTCGAGGACTGCTGGGAAGTGGCTGACACTCACTGCAGCTCGTTCTTTCCTGGTTACAAGTTCCCGTTGGACCTTGTTCTCCGGATTGATCGTTACATTGCTCTCCTCTCTGGATTTTCAGTTCCACCCGGCTGCATGAGGACTTGCCTTGTGGCCGTCAATTCTAATTCTGTAAATAGTAGTTTCAACATCGAGTGTGGAGATGCTACAGATGCCAACTTTGAGAAATACAATCTCAGTAGAGGCTCCGTAGCTGGCATTCTTACACTTGATACAGTGGCAGACTATCTTCCGAGAAGGGGACCCCTGAAGCAGAGAAGGACAGGTATTGCGTATATAGCAAACGTCGCGGTGCGGAAGGAGGAGCGACGGAAAGGGATCGCGAAGATGTTGGTCCAAGAAGCAGAGGCTCGGGCAAGGAGCTGGGGATGCCGGTCGATGGCACTGCACTGCGACGTAAACAACGTGGCCGCGCTACGCCTGTACAGAAACCAAGGCTTCAAGTGCATACGAGTGCCGGAAGGAGCTAAATGGCCCGAACCCAAGATAGCTAAAGGAGCGGAGTACAACTTCATGATGAAGCTAGTGCCCAAGGCTTGAGTCTTGAACCTTATAAGATCTGACTAGGGAAAAAAAGGGAAAGGTTTGGCCGTGTAGGTTCTGCACGGATGCACGATTTGCTCTCCATTCATGTGTACAGCATTTGGTGTATAGTGGAGGCTACTTTGTAAATGGTATATATAACAGCTACGTGTTGGTCCATAGTGAGTGACTGAGGGTGTCGGTGTTTAAACCATCCCCAGTCCTTGTGTTGTTGTGTGTTATGTTCTTCAGATTCTACAAGGTTCCAGCCAGCCAGAAGGCTGCTGGGGCGAACTGCCAGTTCTAAATTGT
MRGPCPGGGVSASFAPSFNGSRAMIWPATVNCTRRIRISFIQTAKTGPFRAGDRATGGICYASQAVELLPTLYPEIVVRD
ARLEDCWEVADTHCSSFFPGYKFPLDLVLRIDRYIALLSGFSVPPGCMRTCLVAVNSNSVNSSFNIECGDATDANFEKYN
LSRGSVAGILTLDTVADYLPRRGPLKQRRYCVYSKRRGAEGGATERDREDVGPRSRGSGKELGMPVDGTALRRKQRGRAT
PVQKPRLQVHTSAGRS
GAAAAAGGACAATGGCTCTCTGTAT...
GAAAAAGGACAATGGCTCTCTGTATCTCATCCTTATCCTTTCCCCACGATTCCTTCTCTCCTCTCTTGCGCCGCCGCTGGCCCAGCGCGGCCGCCGTGCTCCTTCTCCACTCGTGCTTCCCAAGCTGCTTCGCCGGAAGCAATGCGAGGGCCCTGCCCCGGTGGAGGCGTCTCGGCGTCTTTTGCCCCGAGCTTCAACGGCTCCCGCGCCATGATCTGGCCGGCAACAGTAAATTGCACGAGACGGATCCGCATTTCATTCATCCAAACAGCCAAAACGGGGCCGTTCCGCGCAGGCGACAGGGCTACGGGAGGAATTTGCTATGCTAGCCAGGCGGTTGAATTGCTGCCCACTTTGTACCCTGAAATCGTGGTCCGAGACGCACGGCTCGAGGACTGCTGGGAAGTGGCTGACACTCACTGCAGCTCGTTCTTTCCTGGTTACAAGTTCCCGTTGGACCTTGTTCTCCGGATTGATCGTTACATTGCTCTCCTCTCTGGATTTTCAGTTCCACCCGGCTGCATGAGGACTTGCCTTGTGGCCGTCAATTCTAATTCTGTAAATAGTAGTTTCAACATCGAGTGTGGAGATGCTACAGATGCCAACTTTGAGAAATACAATCTCAGTAGAGGCTCCGTAGCTGGCATTCTTACACTTGATACAGTGGCAGACTATCTTCCGAGAAGGGGACCCCTGAAGCAGAGAAGGTATTGCGTATATAGCAAACGTCGCGGTGCGGAAGGAGGAGCGACGGAAAGGGATCGCGAAGATGTTGGTCCAAGAAGCAGAGGCTCGGGCAAGGAGCTGGGGATGCCGGTCGATGGCACTGCACTGCGACGTAAACAACGTGGCCGCGCTACGCCTGTACAGAAACCAAGGCTTCAAGTGCATACGAGTGCCGGAAGGAGCTAAATGGCCCGAACCCAAGATAGCTAAAGGAGCGGAGTACAACTTCATGATGAAGCTAGTGCCCAAGGCTTGAGTCTTGAACCTTATAAGATCTGACTAGGGAAAAAAAGGGAAAGGTTTGGCCGTGTAGGTTCTGCACGGATGCACGATTTGCTCTCCATTCATGTGTACAGCATTTGGTGTATAGTGGAGGCTACTTTGTAAATGGTATATATAACAGCTACGTGTTGGTCCATAGTGAGTGACTGAGGGTGTCGGTGTTTAAACCATCCCCAGTCCTTGTGTTGTTGTGTGTTATGTTCTTCAGATTCTACAAGGTTCCAGCCAGCCAGAAGGCTGCTGGGGCGAACTGCCAGTTCTAAATTGTTTTTTTTTCTGGAGATACAGACCGGCTTGTCATATAGGGCTGGTTTGATAATAAAAAAATTAAATGGATATATGAGAGGAAACTTCTTGCTATTCCAAATCGAATAATCAGAGATTCTCCATAGATTAAACCAGCCCAGCACCAGCCCACCACGAGCTGTGACTCCTCCATATTAATGTTTTTAGAGATGTTTATTAATATTTTTTACAAATCTAATTAAGAAAATAATAGCTGACACAAATACCGTAACAGGATCGGAG
MRGPCPGGGVSASFAPSFNGSRAMIWPATVNCTRRIRISFIQTAKTGPFRAGDRATGGICYASQAVELLPTLYPEIVVRD
ARLEDCWEVADTHCSSFFPGYKFPLDLVLRIDRYIALLSGFSVPPGCMRTCLVAVNSNSVNSSFNIECGDATDANFEKYN
LSRGSVAGILTLDTVADYLPRRGPLKQRRTGIAYIANVAVRKEERRKGIAKMLVQEAEARARSWGCRSMALHCDVNNVAA
LRLYRNQGFKCIRVPEGAKWPEPKIAKGAEYNFMMKLVPKA
GAAAAAGGACAATGGCTCTCTGTAT...
GAAAAAGGACAATGGCTCTCTGTATCTCATCCTTATCCTTTCCCCACGATTCCTTCTCTCCTCTCTTGCGCCGCCGCTGGCCCAGCGCGGCCGCCGTGCTCCTTCTCCACTCGTGCTTCCCAAGCTGCTTCGCCGGAAGCAATGCGAGGGCCCTGCCCCGGTGGAGGCGTCTCGGCGTCTTTTGCCCCGAGCTTCAACGGCTCCCGCGCCATGATCTGGCCGGCAACAGTAAATTGCACGAGACGGATCCGCATTTCATTCATCCAAACAGCCAAAACGGGGCCGTTCCGCGCAGGCGACAGGGCTACGGGAGGAATTTGCTATGCTAGCCAGGCGGTTGAATTGCTGCCCACTTTGTACCCTGAAATCGTGGTCCGAGACGCACGGCTCGAGGACTGCTGGGAAGTGGCTGACACTCACTGCAGCTCGTTCTTTCCTGGTTACAAGTTCCCGTTGGACCTTGTTCTCCGGATTGATCGTTACATTGCTCTCCTCTCTGGATTTTCAGTTCCACCCGGCTGCATGAGGACTTGCCTTGTGGCCGTCAATTCTAATTCTGTAAATAGTAGTTTCAACATCGAGTGTGGAGATGCTACAGATGCCAACTTTGAGAAATACAATCTCAGTAGAGGCTCCGTAGCTGGCATTCTTACACTTGATACAGTGGCAGACTATCTTCCGAGAAGGGGACCCCTGAAGCAGAGAAGGACAGGTATTGCGTATATAGCAAACGTCGCGGTGCGGAAGGAGGAGCGACGGAAAGGGATCGCGAAGATGTTGGTCCAAGAAGCAGAGGCTCGGGCAAGGAGCTGGGGATGCCGGTCGATGGCACTGCACTGCGACGTAAACAACGTGGCCGCGCTACGCCTGTACAGAAACCAAGGCTTCAAGTGCATACGAGTGCCGGAAGGAGCTAAATGGCCCGAACCCAAGATAGCTAAAGGAGCGGAGTACAACTTCATGATGAAGCTAGTGCCCAAGGCTTGAGTCTTGAACCTTATAAGATCTGACTAGGGAAAAAAAGGGAAAGGTTTGGCCGTGTAGGTTCTGCACGGATGCACGATTTGCTCTCCATTCATGTGTACAGCATTTGGTGTATAGTGGAGGCTACTTTGTAAATGGTATATATAACAGCTACGTGTTGGTCCATAGTGAGTGACTGAGGGTGTCGGTGTTTAAACCATCCCCAGTCCTTGTGTTGTTGTGTGTTATGTTCTTCAGATTCTACAAGGTTCCAGCCAGCCAGAAGGCTGCTGGGGCGAACTGCCAGTTCTAAATTGTTTTTTTTTCTGGAGATACAGACCGGCTTGTCATATAGGGCTGGTTTGATAATAAAAAAATTAAATGGATATATGAGAGGAAACTTCTTGCTATTC
Copyright © 2023 Grassius.org | Last updated: 2023-06-26